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BMCBI
2007
265views more  BMCBI 2007»
13 years 10 months ago
Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...
INFOCOM
2009
IEEE
14 years 4 months ago
Circuits/Cutsets Duality and a Unified Algorithmic Framework for Survivable Logical Topology Design in IP-over-WDM Optical Netwo
: Given a logical topology and a physical topology , the survivable logical topology design problem in an IP-overWDM optical network is to map the logical links into lightpaths in ...
Krishnaiyan Thulasiraman, Muhammad S. Javed, Guoli...
GECCO
2005
Springer
186views Optimization» more  GECCO 2005»
14 years 3 months ago
Subproblem optimization by gene correlation with singular value decomposition
Several ways of using singular value decomposition (SVD), a linear algebra technique typically used for information retrieval, to decompose problems into subproblems are investiga...
Jacob G. Martin
SIGMOD
2004
ACM
149views Database» more  SIGMOD 2004»
14 years 10 months ago
Incremental Maintenance of XML Structural Indexes
Increasing popularity of XML in recent years has generated much interest in query processing over graph-structured data. To support efficient evaluation of path expressions, many ...
Ke Yi, Hao He, Ioana Stanoi, Jun Yang 0001
AIS
2004
Springer
14 years 3 months ago
Integrated Term Weighting, Visualization, and User Interface Development for Bioinformation Retrieval
This project implements an integrated biological information website that classifies technical documents, learns about users' interests, and offers intuitive interactive visua...
Min Hong, Anis Kairmpour-fard, Steve Russell, Lawr...