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RSFDGRC
2005
Springer
192views Data Mining» more  RSFDGRC 2005»
14 years 1 months ago
An Open Source Microarray Data Analysis System with GUI: Quintet
We address Quintet, an R-based unified cDNA microarray data analysis system with GUI. Five principal categories of microarray data analysis have been coherently integrated in Quin...
Jun-kyoung Choe, Tae-Hoon Chung, Sunyong Park, Hwa...
EOR
2007
110views more  EOR 2007»
13 years 7 months ago
A hierarchical ant based clustering algorithm and its use in three real-world applications
In this paper is presented a new model for data clustering, which is inspired from the selfassembly behavior of real ants. Real ants can build complex structures by connecting the...
Hanene Azzag, Gilles Venturini, Antoine Oliver, Ch...
ECAL
2001
Springer
14 years 6 days ago
Taxonomy in Alife. Measures of Similarity for Complex Artificial Organisms
In this paper a formal approach to construction of a similarity measure for complex creatures is presented. The simulation model is described, and a Framsticks agent is expressed i...
Maciej Komosinski, Marek Kubiak
BMCBI
2007
134views more  BMCBI 2007»
13 years 7 months ago
Nearest Neighbor Networks: clustering expression data based on gene neighborhoods
Background: The availability of microarrays measuring thousands of genes simultaneously across hundreds of biological conditions represents an opportunity to understand both indiv...
Curtis Huttenhower, Avi I. Flamholz, Jessica N. La...
JCB
2006
129views more  JCB 2006»
13 years 7 months ago
GenRate: A Generative Model that Reveals Novel Transcripts in Genome-Tiling Microarray Data
Genome-wide microarray designs containing millions to hundreds of millions of probes are available for a variety of mammals, including mouse and human. These genome tiling arrays ...
Brendan J. Frey, Quaid Morris, Timothy R. Hughes