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    BMCBI
    2008
    204views more  BMCBI 2008»
    EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
    13 years 8 months ago
    EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
    Download  www.biomedcentral.com
    Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
    Javier Forment, Francisco Gilabert Villamón...
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    BMCBI
    2007
    142views more  BMCBI 2007»
    Improving model construction of profile HMMs for remote homology detection through structural alignment
    13 years 8 months ago
    Improving model construction of profile HMMs for remote homology detection through structural alignment
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    Background: Remote homology detection is a challenging problem in Bioinformatics. Arguably, profile Hidden Markov Models (pHMMs) are one of the most successful approaches in addre...
    Juliana S. Bernardes, Alberto M. R. Dávila,...
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    BMCBI
    2008
    97views more  BMCBI 2008»
    Comparison study on k-word statistical measures for protein: From sequence to 'sequence space'
    13 years 8 months ago
    Comparison study on k-word statistical measures for protein: From sequence to 'sequence space'
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    Background: Many proposed statistical measures can efficiently compare protein sequence to further infer protein structure, function and evolutionary information. They share the s...
    Qi Dai, Tian-Ming Wang
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    BMCBI
    2008
    130views more  BMCBI 2008»
    An enhanced partial order curve comparison algorithm and its application to analyzing protein folding trajectories
    13 years 8 months ago
    An enhanced partial order curve comparison algorithm and its application to analyzing protein folding trajectories
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    Background: Understanding how proteins fold is essential to our quest in discovering how life works at the molecular level. Current computation power enables researchers to produc...
    Hong Sun, Hakan Ferhatosmanoglu, Motonori Ota, Yus...
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    BMCBI
    2008
    173views more  BMCBI 2008»
    Gene Vector Analysis (Geneva): A unified method to detect differentially-regulated gene sets and similar microarray experiments
    13 years 8 months ago
    Gene Vector Analysis (Geneva): A unified method to detect differentially-regulated gene sets and similar microarray experiments
    Download  www.biomedcentral.com
    Background: Microarray experiments measure changes in the expression of thousands of genes. The resulting lists of genes with changes in expression are then searched for biologica...
    Stephen W. Tanner, Pankaj Agarwal
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