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» Small Phylogeny Problem: Character Evolution Trees
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STOC
1996
ACM
92views Algorithms» more  STOC 1996»
13 years 11 months ago
Constructing Evolutionary Trees in the Presence of Polymorphic Characters
Abstract. Most phylogenetics literature and construction methods based upon characters presume monomorphism (one state per character per species), yet polymorphism (multiple states...
Maria Luisa Bonet, Cynthia A. Phillips, Tandy Warn...
NAR
2006
120views more  NAR 2006»
13 years 7 months ago
TreeDomViewer: a tool for the visualization of phylogeny and protein domain structure
Phylogenetic analysis and examination of protein domains allow accurate genome annotation and are invaluable to study proteins and protein complex evolution. However, two sequence...
Blaise T. F. Alako, Daphne Rainey, Harm Nijveen, J...
CORR
2011
Springer
235views Education» more  CORR 2011»
13 years 2 months ago
On the accuracy of language trees
Historical linguistics aims at inferring the most likely language phylogenetic tree starting from information concerning the evolutionary relatedness of languages. The available i...
Simone Pompei, Vittorio Loreto, Francesca Tria
ICPADS
2005
IEEE
14 years 1 months ago
PRec-I-DCM3: A Parallel Framework for Fast and Accurate Large Scale Phylogeny Reconstruction
: Accurate reconstruction of phylogenetic trees very often involves solving hard optimization problems, particularly the maximum parsimony (MP) and maximum likelihood (ML) problems...
Cristian Coarfa, Yuri Dotsenko, John M. Mellor-Cru...
ISMB
2007
13 years 9 months ago
Polyploids, genome halving and phylogeny
Autopolyploidization and allopolyploidization events multiply the number of chromosomes and genomic content. Genome rearrangement phylogenetics requires that all genomes analyzed ...
David Sankoff, Chunfang Zheng, Qian Zhu