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» Solving Alignment Using Elementary Linear Algebra
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RECOMB
1997
Springer
13 years 11 months ago
A branch-and-cut algorithm for multiple sequence alignment
Multiple sequence alignment is an important problem in computational biology. We study the Maximum Trace formulation introduced by Kececioglu [?]. We first phrase the problem in ...
Knut Reinert, Hans-Peter Lenhof, Petra Mutzel, Kur...
RECOMB
2002
Springer
14 years 7 months ago
Revealing protein structures: a new method for mapping antibody epitopes
A recent idea for determining the three-dimensional structure of a protein uses antibody recognition of surface structure and random peptide libraries to map antibody epitope comb...
Brendan Mumey, Brian W. Bailey, Edward A. Dratz
CORR
2011
Springer
220views Education» more  CORR 2011»
13 years 2 months ago
On a linear programming approach to the discrete Willmore boundary value problem and generalizations
We consider the problem of finding (possibly non connected) discrete surfaces spanning a finite set of discrete boundary curves in the three-dimensional space and minimizing (glo...
Thomas Schoenemann, Simon Masnou, Daniel Cremers
ICCV
2009
IEEE
13 years 5 months ago
An algebraic model for fast corner detection
This paper revisits the classical problem of detecting interest points, popularly known as "corners," in 2D images by proposing a technique based on fitting algebraic sh...
Andrew Willis, Yunfeng Sui
ISAAC
2004
Springer
114views Algorithms» more  ISAAC 2004»
14 years 24 days ago
Structural Alignment of Two RNA Sequences with Lagrangian Relaxation
RNA is generally a single-stranded molecule where the bases form hydrogen bonds within the same molecule leading to structure formation. In comparing different homologous RNA mole...
Markus Bauer, Gunnar W. Klau