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» Some Aspects of Computable Functional Analysis
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BMCBI
2010
108views more  BMCBI 2010»
13 years 6 months ago
BIGSdb: Scalable analysis of bacterial genome variation at the population level
Background: The opportunities for bacterial population genomics that are being realised by the application of parallel nucleotide sequencing require novel bioinformatics platforms...
Keith A. Jolley, Martin C. J. Maiden
LISP
2008
104views more  LISP 2008»
13 years 8 months ago
On the implementation of automatic differentiation tools
Automatic differentiation is a semantic transformation that applies the rules of differential calculus to source code. It thus transforms a computer program that computes a mathema...
Christian H. Bischof, Paul D. Hovland, Boyana Norr...
BMCBI
2008
176views more  BMCBI 2008»
13 years 8 months ago
H2r: Identification of evolutionary important residues by means of an entropy based analysis of multiple sequence alignments
Background: A multiple sequence alignment (MSA) generated for a protein can be used to characterise residues by means of a statistical analysis of single columns. In addition to t...
Rainer Merkl, Matthias Zwick
COMPGEOM
2011
ACM
13 years 8 days ago
Reeb graphs: approximation and persistence
Given a continuous function f : X → IR on a topological space X, its level set f−1 (a) changes continuously as the real value a changes. Consequently, the connected components...
Tamal K. Dey, Yusu Wang
COMPSAC
2009
IEEE
14 years 3 months ago
SN2K Attacks and Honest Services
—In this paper, we define and illustrate a new form of attack in the context of software services: the software-based need-to-know (SN2K) attack. SN2K attacks can be carried out...
Ashish Kundu