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» Spatially-Aware Comparison and Consensus for Clusterings
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BMCBI
2007
133views more  BMCBI 2007»
13 years 7 months ago
MATLIGN: a motif clustering, comparison and matching tool
Background: Sequence motifs representing transcription factor binding sites (TFBS) are commonly encoded as position frequency matrices (PFM) or degenerate consensus sequences (CS)...
Matti Kankainen, Ari Löytynoja
BMCBI
2007
168views more  BMCBI 2007»
13 years 7 months ago
Benchmarking consensus model quality assessment for protein fold recognition
Background: Selecting the highest quality 3D model of a protein structure from a number of alternatives remains an important challenge in the field of structural bioinformatics. M...
Liam J. McGuffin
EMNLP
2010
13 years 5 months ago
Two Decades of Unsupervised POS Induction: How Far Have We Come?
Part-of-speech (POS) induction is one of the most popular tasks in research on unsupervised NLP. Many different methods have been proposed, yet comparisons are difficult to make s...
Christos Christodoulopoulos, Sharon Goldwater, Mar...
EVOW
2006
Springer
13 years 10 months ago
Hierarchical Clustering, Languages and Cancer
In this paper, we introduce a novel objective function for the hierarchical clustering of data from distance matrices, a very relevant task in Bioinformatics. To test the robustnes...
Pritha Mahata, Wagner Costa, Carlos Cotta, Pablo M...
KDD
2005
ACM
177views Data Mining» more  KDD 2005»
14 years 18 days ago
Combining partitions by probabilistic label aggregation
Data clustering represents an important tool in exploratory data analysis. The lack of objective criteria render model selection as well as the identification of robust solutions...
Tilman Lange, Joachim M. Buhmann