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Spatio-Temporal Alignment of Sequences
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BIOINFORMATICS
2006
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SCARNA: fast and accurate structural alignment of RNA sequences by matching fixed-length stem fragments
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Yasuo Tabei, Koji Tsuda, Taishin Kin, Kiyoshi Asai
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Probalign: multiple sequence alignment using partition function posterior probabilities
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Usman Roshan, Dennis R. Livesay
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BIOINFORMATICS
2006
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ARCS: an aggregated related column scoring scheme for aligned sequences
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Bin Song, Jeong-Hyeon Choi, Guangyu Chen, Jacek Sz...
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BMCBI
2006
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Choosing the best heuristic for seeded alignment of DNA sequences
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Yanni Sun, Jeremy Buhler
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BMCBI
2007
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Accurate multiple sequence-structure alignment of RNA sequences using combinatorial optimization
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Markus Bauer, Gunnar W. Klau, Knut Reinert
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