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BMCBI
2011
12 years 11 months ago
Inference of Chromosome-Specific Copy Numbers Using Population Haplotypes
Background: Using microarray and sequencing platforms, a large number of copy number variations (CNVs) have been identified in humans. In practice, because our human genome is a d...
Yao-Ting Huang, Min-Han Wu
UAI
2008
13 years 8 months ago
Adaptive inference on general graphical models
Many algorithms and applications involve repeatedly solving variations of the same inference problem; for example we may want to introduce new evidence to the model or perform upd...
Umut A. Acar, Alexander T. Ihler, Ramgopal R. Mett...
TCBB
2008
122views more  TCBB 2008»
13 years 7 months ago
Mixed Integer Linear Programming for Maximum-Parsimony Phylogeny Inference
Reconstruction of phylogenetic trees is a fundamental problem in computational biology. While excellent heuristic methods are available for many variants of this problem, new adva...
Srinath Sridhar, Fumei Lam, Guy E. Blelloch, R. Ra...
MICCAI
2010
Springer
13 years 5 months ago
Nonlinear Embedding towards Articulated Spine Shape Inference Using Higher-Order MRFs
In this paper we introduce a novel approach for inferring articulated spine models from images. A low-dimensional manifold embedding is created from a training set of prior mesh mo...
Samuel Kadoury, Nikos Paragios
ICML
2008
IEEE
14 years 8 months ago
Gaussian process product models for nonparametric nonstationarity
Stationarity is often an unrealistic prior assumption for Gaussian process regression. One solution is to predefine an explicit nonstationary covariance function, but such covaria...
Ryan Prescott Adams, Oliver Stegle