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BMCBI
2010
138views more  BMCBI 2010»
13 years 10 months ago
UFFizi: a generic platform for ranking informative features
Background: Feature selection is an important pre-processing task in the analysis of complex data. Selecting an appropriate subset of features can improve classification or cluste...
Assaf Gottlieb, Roy Varshavsky, Michal Linial, Dav...
BMCBI
2008
184views more  BMCBI 2008»
13 years 10 months ago
Integrating protein-protein interactions and text mining for protein function prediction
Background: Functional annotation of proteins remains a challenging task. Currently the scientific literature serves as the main source for yet uncurated functional annotations, b...
Samira Jaeger, Sylvain Gaudan, Ulf Leser, Dietrich...
CORR
2006
Springer
100views Education» more  CORR 2006»
13 years 10 months ago
Pivotal and Pivotal-discriminative Consequence Relations
In the present paper, we investigate consequence relations that are both paraconsistent and plausible (but still monotonic). More precisely, we put the focus on pivotal consequenc...
Jonathan Ben-Naim
BMCBI
2007
105views more  BMCBI 2007»
13 years 10 months ago
Finding regulatory elements and regulatory motifs: a general probabilistic framework
Over the last two decades a large number of algorithms has been developed for regulatory motif finding. Here we show how many of these algorithms, especially those that model bind...
Erik van Nimwegen
JMLR
2006
169views more  JMLR 2006»
13 years 10 months ago
Bayesian Network Learning with Parameter Constraints
The task of learning models for many real-world problems requires incorporating domain knowledge into learning algorithms, to enable accurate learning from a realistic volume of t...
Radu Stefan Niculescu, Tom M. Mitchell, R. Bharat ...