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ICPPW
2009
IEEE
13 years 4 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
KAIS
2011
129views more  KAIS 2011»
13 years 1 months ago
Counting triangles in real-world networks using projections
Triangle counting is an important problem in graph mining. Two frequently used metrics in complex network analysis which require the count of triangles are the clustering coefficie...
Charalampos E. Tsourakakis
WSDM
2012
ACM
301views Data Mining» more  WSDM 2012»
12 years 2 months ago
Learning evolving and emerging topics in social media: a dynamic nmf approach with temporal regularization
As massive repositories of real-time human commentary, social media platforms have arguably evolved far beyond passive facilitation of online social interactions. Rapid analysis o...
Ankan Saha, Vikas Sindhwani
KDD
2007
ACM
136views Data Mining» more  KDD 2007»
14 years 7 months ago
Information genealogy: uncovering the flow of ideas in non-hyperlinked document databases
We now have incrementally-grown databases of text documents ranging back for over a decade in areas ranging from personal email, to news-articles and conference proceedings. While...
Benyah Shaparenko, Thorsten Joachims
RECOMB
2005
Springer
14 years 7 months ago
Learning Interpretable SVMs for Biological Sequence Classification
Background: Support Vector Machines (SVMs) ? using a variety of string kernels ? have been successfully applied to biological sequence classification problems. While SVMs achieve ...
Christin Schäfer, Gunnar Rätsch, Sö...