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» Statistical tools for regional data analysis using GIS
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IPPS
2006
IEEE
14 years 2 months ago
The monitoring request interface (MRI)
In this paper we present MRI, a high level interface for selective monitoring of code regions and data structures in single and multiprocessor environments. MRI keeps transparent ...
Edmond Kereku, Michael Gerndt
BMCBI
2010
134views more  BMCBI 2010»
13 years 9 months ago
ScreenMill: A freely available software suite for growth measurement, analysis and visualization of high-throughput screen data
Background: Many high-throughput genomic experiments, such as Synthetic Genetic Array and yeast two-hybrid, use colony growth on solid media as a screen metric. These experiments ...
John C. Dittmar, Robert J. D. Reid, Rodney Rothste...
CVPR
2010
IEEE
14 years 2 months ago
Anatomical Parts-Based Regression Using Non-Negative Matrix Factorization
Non-negative matrix factorization (NMF) is an excellent tool for unsupervised parts-based learning, but proves to be ineffective when parts of a whole follow a specific pattern. ...
Swapna Joshi, Karthikeyan Shanmugavadivel, B.S. Ma...
ISMB
2000
13 years 10 months ago
Mining for Putative Regulatory Elements in the Yeast Genome Using Gene Expression Data
We have developed a set of methods and tools for automatic discovery of putative regulatory signals in genome sequences. The analysis pipeline consists of gene expression data clu...
Jaak Vilo, Alvis Brazma, Inge Jonassen, Alan J. Ro...
BMCBI
2007
99views more  BMCBI 2007»
13 years 9 months ago
Statistical significance of cis-regulatory modules
Background: It is becoming increasingly important for researchers to be able to scan through large genomic regions for transcription factor binding sites or clusters of binding si...
Dustin E. Schones, Andrew D. Smith, Michael Q. Zha...