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GECCO
2008
Springer
146views Optimization» more  GECCO 2008»
13 years 10 months ago
A formal performance modeling framework for bio-inspired ad hoc routing protocols
Bio-inspired ad hoc routing is an active area of research. The designers of these algorithms predominantly evaluate the performance of their protocols with the help of simulation ...
Muhammad Saleem, Syed Ali Khayam, Muddassar Farooq
BMCBI
2010
104views more  BMCBI 2010»
13 years 9 months ago
Formal reasoning on qualitative models of coinfection of HIV and Tuberculosis and HAART therapy
Background: Several diseases, many of which nowadays pandemic, consist of multifactorial pathologies. Paradigmatic examples come from the immune response to pathogens, in which ca...
Anil Sorathiya, Andrea Bracciali, Pietro Liò...
BMCBI
2007
160views more  BMCBI 2007»
13 years 9 months ago
Identifying protein complexes directly from high-throughput TAP data with Markov random fields
Background: Predicting protein complexes from experimental data remains a challenge due to limited resolution and stochastic errors of high-throughput methods. Current algorithms ...
Wasinee Rungsarityotin, Roland Krause, Arno Sch&ou...
BMCBI
2008
154views more  BMCBI 2008»
13 years 9 months ago
GeNESiS: gene network evolution simulation software
Background: There has been a lot of interest in recent years focusing on the modeling and simulation of Gene Regulatory Networks (GRNs). However, the evolutionary mechanisms that ...
Anton Kratz, Masaru Tomita, Arun Krishnan
BMCBI
2008
95views more  BMCBI 2008»
13 years 9 months ago
Unsupervised reduction of random noise in complex data by a row-specific, sorted principal component-guided method
Background: Large biological data sets, such as expression profiles, benefit from reduction of random noise. Principal component (PC) analysis has been used for this purpose, but ...
Joseph W. Foley, Fumiaki Katagiri