Sciweavers

41 search results - page 7 / 9
» Stochastic Simulation Algorithms for Chemical Reactions
Sort
View
EUROGP
2006
Springer
140views Optimization» more  EUROGP 2006»
14 years 2 days ago
Evolving Noisy Oscillatory Dynamics in Genetic Regulatory Networks
We introduce a genetic programming (GP) approach for evolving genetic networks that demonstrate desired dynamics when simulated as a discrete stochastic process. Our representation...
André Leier, P. Dwight Kuo, Wolfgang Banzha...
JCB
2006
114views more  JCB 2006»
13 years 8 months ago
A General Modeling Strategy for Gene Regulatory Networks with Stochastic Dynamics
A stochastic genetic toggle switch model that consists of two identical, mutually repressive genes is built using the Gillespie algorithm with time delays as an example of a simpl...
Andre Ribeiro, Rui Zhu, Stuart A. Kauffman
QEST
2010
IEEE
13 years 6 months ago
Automating the Mean-Field Method for Large Dynamic Gossip Networks
Abstract--We investigate an abstraction method, called meanfield method, for the performance evaluation of dynamic networks with pairwise communication between nodes. It allows us ...
Rena Bakhshi, Jörg Endrullis, Stefan Endrulli...
LICS
2010
IEEE
13 years 6 months ago
Abstracting the Differential Semantics of Rule-Based Models: Exact and Automated Model Reduction
ing the differential semantics of rule-based models: exact and automated model reduction (Invited Lecture) Vincent Danos∗§, J´erˆome Feret†, Walter Fontana‡, Russell Harme...
Vincent Danos, Jérôme Feret, Walter F...
WABI
2005
Springer
124views Bioinformatics» more  WABI 2005»
14 years 1 months ago
Reconstructing Metabolic Networks Using Interval Analysis
Recently, there has been growing interest in the modelling and simulation of biological systems. Such systems are often modelled in terms of coupled ordinary differential equation...
Warwick Tucker, Vincent Moulton