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BMCBI
2011
13 years 2 months ago
Multithreaded comparative RNA secondary structure prediction using stochastic context-free grammars
Background: The prediction of the structure of large RNAs remains a particular challenge in bioinformatics, due to the computational complexity and low levels of accuracy of state...
Zsuzsanna Sukosd, Bjarne Knudsen, Morten Vaerum, J...
COMPLIFE
2005
Springer
14 years 1 months ago
Protein Annotation by Secondary Structure Based Alignments (PASSTA)
Abstract. Most software tools in homology recognition on proteins answer only a few specific questions, often leaving not much room for the interpretation of the results. We devel...
Constantin Bannert, Jens Stoye
WABI
2005
Springer
110views Bioinformatics» more  WABI 2005»
14 years 1 months ago
Alignment of Tandem Repeats with Excision, Duplication, Substitution and Indels (EDSI)
Abstract. Traditional sequence comparison by alignment applies a mutation model comprising two events, substitutions and indels (insertions or deletions) of single positions (SI). ...
Michael Sammeth, Thomas Weniger, Dag Harmsen, Jens...
ICRA
2010
IEEE
145views Robotics» more  ICRA 2010»
13 years 6 months ago
High quality pose estimation by aligning multiple scans to a latent map
Abstract— We introduce a method for fast and accurate registration of multiple horizontal laser scans obtained by a mobile robot. The method is based on novel representation of t...
Qi-Xing Huang, Dragomir Anguelov
TCSV
2010
13 years 2 months ago
Near Duplicate Identification With Spatially Aligned Pyramid Matching
Abstract--A new framework, termed Spatially Aligned Pyramid Matching (SAPM), is proposed for Near Duplicate Image Identification. The proposed method robustly handles spatial shift...
Dong Xu, Tat-Jen Cham, Shuicheng Yan, Lixin Duan, ...