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JCB
2008
122views more  JCB 2008»
13 years 7 months ago
Space Efficient Computation of Rare Maximal Exact Matches between Multiple Sequences
In this article, we propose a new method for computing rare maximal exact matches between multiple sequences. A rare match between k sequences S1; : : :; Sk is a string that occur...
Enno Ohlebusch, Stefan Kurtz
NAR
2006
164views more  NAR 2006»
13 years 7 months ago
FISH - family identification of sequence homologues using structure anchored hidden Markov models
The FISH server is highly accurate in identifying the family membership of domains in a query protein sequence, even in the case of very low sequence identities to known homologue...
Jeanette Tångrot, Lixiao Wang, Bo Kågs...
ICASSP
2008
IEEE
14 years 2 months ago
On the synchrony of empirical mode decompositions with application to electroencephalography
A novel approach to measure the interdependence of time series is proposed, based on the alignment (“matching”) of their Huang-Hilbert spectra. The method consists of three st...
Justin Dauwels, Tomasz M. Rutkowski, Franço...
CSB
2003
IEEE
116views Bioinformatics» more  CSB 2003»
14 years 29 days ago
Towards Index-based Similarity Search for Protein Structure Databases
We propose two methods for finding similarities in protein structure databases. Our techniques extract feature vectors on triplets of SSEs (Secondary Structure Elements) of prote...
Orhan Çamoglu, Tamer Kahveci, Ambuj K. Sing...
TOG
2012
253views Communications» more  TOG 2012»
11 years 10 months ago
Exploring collections of 3D models using fuzzy correspondences
Large collections of 3D models from the same object class (e.g., chairs, cars, animals) are now commonly available via many public repositories, but exploring the range of shape v...
Vladimir G. Kim, Wilmot Li, Niloy J. Mitra, Stephe...