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» Stochastic pairwise alignments
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ICASSP
2008
IEEE
14 years 2 months ago
Fusion of cleavage site detection and pairwise alignment for fast subcellular localization
In recent years, homology-based and signal-based methods have been proposed for predicting the subcellular localization of proteins. While it has been known that homology-based me...
Man-Wai Mak, Sun-Yuan Kung
IROS
2009
IEEE
172views Robotics» more  IROS 2009»
14 years 2 months ago
Pairwise region-based scan alignment
— In this paper, we present a new algorithm for the alignment of two 3D scans. The approach uses a region-based matching technique. We make no assumptions about the initial posit...
Carla Silva Rocha Aguiar, Sébastien Druon, ...
JCB
2008
106views more  JCB 2008»
13 years 7 months ago
Statistics of Random Protein Superpositions: p-Values for Pairwise Structure Alignment
Quantification of statistical significance is essential for the interpretation of protein structural similarity. To address this, a random model for protein structure comparison w...
James O. Wrabl, Nick V. Grishin
CIBB
2008
13 years 9 months ago
Analysis of Kernel Based Protein Classification Strategies Using Pairwise Sequence Alignment Measures
Abstract. We evaluated methods of protein classification that use kernels built from BLAST output parameters. Protein sequences were represented as vectors of parameters (e.g. simi...
Dino Franklin, Somdutta Dhir, Sándor Pongor