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BMCBI
2007
136views more  BMCBI 2007»
13 years 10 months ago
Comparison of protein structures by growing neighborhood alignments
Background: Design of protein structure comparison algorithm is an important research issue, having far reaching implications. In this article, we describe a protein structure com...
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, ...
BMCBI
2004
120views more  BMCBI 2004»
13 years 9 months ago
An approach to large scale identification of non-obvious structural similarities between proteins
Background: A new sequence independent bioinformatics approach allowing genome-wide search for proteins with similar three dimensional structures has been developed. By utilizing ...
Artem Cherkasov, Steven J. M. Jones
JACM
2000
81views more  JACM 2000»
13 years 9 months ago
Relational queries over interpreted structures
We rework parts of the classical relational theory when the underlying domain is a structure with some interpreted operations that can be used in queries. We identify parts of the...
Michael Benedikt, Leonid Libkin
IWFM
1998
113views Formal Methods» more  IWFM 1998»
13 years 11 months ago
A Use Case Interpretation of B AMN
In this paper we suggest methods to aid the development of specifications using the B method. We propose an objectoriented approach to specification, developing the structure thro...
Richard Shore
BMCBI
2010
74views more  BMCBI 2010»
13 years 10 months ago
A weighted q-gram method for glycan structure classification
Background: Glycobiology pertains to the study of carbohydrate sugar chains, or glycans, in a particular cell or organism. Many computational approaches have been proposed for ana...
Limin Li, Wai-Ki Ching, Takako Yamaguchi, Kiyoko F...