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BMCBI
2008
131views more  BMCBI 2008»
13 years 7 months ago
Modifying the DPClus algorithm for identifying protein complexes based on new topological structures
Background: Identification of protein complexes is crucial for understanding principles of cellular organization and functions. As the size of protein-protein interaction set incr...
Min Li, Jianer Chen, Jianxin Wang, Bin Hu, Gang Ch...
SDM
2009
SIAM
175views Data Mining» more  SDM 2009»
14 years 4 months ago
Low-Entropy Set Selection.
Most pattern discovery algorithms easily generate very large numbers of patterns, making the results impossible to understand and hard to use. Recently, the problem of instead sel...
Hannes Heikinheimo, Jilles Vreeken, Arno Siebes, H...
BMCBI
2007
154views more  BMCBI 2007»
13 years 7 months ago
Inferring biological networks with output kernel trees
Background: Elucidating biological networks between proteins appears nowadays as one of the most important challenges in systems biology. Computational approaches to this problem ...
Pierre Geurts, Nizar Touleimat, Marie Dutreix, Flo...
IJCAI
2007
13 years 9 months ago
Compiling Bayesian Networks by Symbolic Probability Calculation Based on Zero-Suppressed BDDs
Compiling Bayesian networks (BNs) is one of the hot topics in the area of probabilistic modeling and processing. In this paper, we propose a new method of compiling BNs into multi...
Shin-ichi Minato, Ken Satoh, Taisuke Sato
JCB
2007
198views more  JCB 2007»
13 years 7 months ago
Bayesian Hierarchical Model for Large-Scale Covariance Matrix Estimation
Many bioinformatics problems can implicitly depend on estimating large-scale covariance matrix. The traditional approaches tend to give rise to high variance and low accuracy esti...
Dongxiao Zhu, Alfred O. Hero III