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BMCBI
2007
142views more  BMCBI 2007»
13 years 8 months ago
SABERTOOTH: protein structural alignment based on a vectorial structure representation
Background: The task of computing highly accurate structural alignments of proteins in very short computation time is still challenging. This is partly due to the complexity of pr...
Florian Teichert, Ugo Bastolla, Markus Porto
BMCBI
2008
128views more  BMCBI 2008»
13 years 8 months ago
Pairwise covariance adds little to secondary structure prediction but improves the prediction of non-canonical local structure
Background: Amino acid sequence probability distributions, or profiles, have been used successfully to predict secondary structure and local structure in proteins. Profile models ...
Christopher Bystroff, Bobbie-Jo M. Webb-Robertson
VLDB
2002
ACM
97views Database» more  VLDB 2002»
13 years 8 months ago
Structural Function Inlining Technique for Structurally Recursive XML Queries
Structurally recursive XML queries are an important query class that follows the structure of XML data. At present, it is difficult for XQuery to type and optimize structurally re...
Chang-Won Park, Jun-Ki Min, Chin-Wan Chung
ESANN
2004
13 years 10 months ago
Functional radial basis function networks
There has been recently a lot of interest for functional data analysis [1] and extensions of well-known methods to functional inputs (clustering algorithm [2], non-parametric model...
Nicolas Delannay, Fabrice Rossi, Brieuc Conan-Guez...
BDA
1993
13 years 10 months ago
Querying and Updating the File
We show how structured data stored in files can benefit from standard database technology and in particular be queried and updated using database languages. We introduce the notio...
Serge Abiteboul, Sophie Cluet, Tova Milo