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» Structure compilation: trading structure for features
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BMCBI
2010
141views more  BMCBI 2010»
13 years 7 months ago
Genome scale prediction of substrate specificity for acyl adenylate superfamily of enzymes based on active site residue profiles
Background: Enzymes belonging to acyl:CoA synthetase (ACS) superfamily activate wide variety of substrates and play major role in increasing the structural and functional diversit...
Pankaj Khurana, Rajesh S. Gokhale, Debasisa Mohant...
ML
2007
ACM
134views Machine Learning» more  ML 2007»
13 years 6 months ago
Status report: the manticore project
The Manticore project is an effort to design and implement a new functional language for parallel programming. Unlike many earlier parallel languages, Manticore is a heterogeneous...
Matthew Fluet, Nic Ford, Mike Rainey, John H. Repp...
NAR
2007
81views more  NAR 2007»
13 years 6 months ago
Pseudogene.org: a comprehensive database and comparison platform for pseudogene annotation
The Pseudogene.org database serves as a comprehensive repository for pseudogene sequence annotation. The definition of a pseudogene varies within the literature, resulting in sign...
John E. Karro, Yangpan Yan, Deyou Zheng, Zhaolei Z...
ICFP
2008
ACM
14 years 7 months ago
Implicitly-threaded parallelism in Manticore
The increasing availability of commodity multicore processors is making parallel computing available to the masses. Traditional parallel languages are largely intended for large-s...
Matthew Fluet, Mike Rainey, John H. Reppy, Adam Sh...
PPOPP
2006
ACM
14 years 1 months ago
McRT-STM: a high performance software transactional memory system for a multi-core runtime
Applications need to become more concurrent to take advantage of the increased computational power provided by chip level multiprocessing. Programmers have traditionally managed t...
Bratin Saha, Ali-Reza Adl-Tabatabai, Richard L. Hu...