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» Structure compilation: trading structure for features
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BMCBI
2005
159views more  BMCBI 2005»
13 years 7 months ago
Columba: an integrated database of proteins, structures, and annotations
Background: Structural and functional research often requires the computation of sets of protein structures based on certain properties of the proteins, such as sequence features,...
Silke Trißl, Kristian Rother, Heiko Mül...
BMCBI
2007
141views more  BMCBI 2007»
13 years 7 months ago
Using structural motif descriptors for sequence-based binding site prediction
Background: Many protein sequences are still poorly annotated. Functional characterization of a protein is often improved by the identification of its interaction partners. Here, ...
Andreas Henschel, Christof Winter, Wan Kyu Kim, Mi...
AAAI
2008
13 years 9 months ago
Adapting ADtrees for High Arity Features
ADtrees, a data structure useful for caching sufficient statistics, have been successfully adapted to grow lazily when memory is limited and to update sequentially with an increme...
Robert Van Dam, Irene Langkilde-Geary, Dan Ventura
JELIA
1998
Springer
13 years 11 months ago
A Logic for Anytime Deduction and Anytime Compilation
Abstract. One of the maincharacteristics of logical reasoning in knowledge based systems is its high computational complexity. Anytime deduction and anytime compilation are two att...
Frédéric Koriche
SBMF
2009
Springer
105views Formal Methods» more  SBMF 2009»
14 years 1 months ago
Verifying Compiled File System Code
Abstract. This paper presents a case study on retrospective verication of the Linux Virtual File System (VFS), which is aimed at checking for violations of API usage rules and mem...
Jan Tobias Mühlberg, Gerald Lüttgen