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BMCBI
2007
96views more  BMCBI 2007»
13 years 6 months ago
Protein subcellular localization prediction based on compartment-specific features and structure conservation
Motivation: Protein subcellular localization is crucial for genome annotation, protein function prediction, and drug discovery. However, since determining subcellular localization...
Emily Chia-Yu Su, Hua-Sheng Chiu, Allan Lo, Jenn-K...
BMCBI
2004
133views more  BMCBI 2004»
13 years 6 months ago
Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction
Background: RNA secondary structure prediction methods based on probabilistic modeling can be developed using stochastic context-free grammars (SCFGs). Such methods can readily co...
Robin D. Dowell, Sean R. Eddy
BMCBI
2008
96views more  BMCBI 2008»
13 years 6 months ago
MSDmotif: exploring protein sites and motifs
Background: Protein structures have conserved features
Adel Golovin, Kim Henrick
CPHYSICS
2006
135views more  CPHYSICS 2006»
13 years 6 months ago
USPEX - Evolutionary crystal structure prediction
We approach the problem of computational crystal structure prediction, implementing an evolutionary algorithm--USPEX (Universal Structure Predictor: Evolutionary Xtallography). St...
Colin W. Glass, Artem R. Oganov, Nikolaus Hansen
BMCBI
2006
150views more  BMCBI 2006»
13 years 6 months ago
Predicting protein subcellular locations using hierarchical ensemble of Bayesian classifiers based on Markov chains
Background: The subcellular location of a protein is closely related to its function. It would be worthwhile to develop a method to predict the subcellular location for a given pr...
Alla Bulashevska, Roland Eils