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2004
Springer
14 years 5 days ago
A Memetic Algorithm for Protein Structure Prediction in a 3D-Lattice HP Model
This paper presents a memetic algorithm with self-adaptive local search, applied to protein structure prediction in an HP, cubiclattice model. Besides describing in detail how the ...
Andrea Bazzoli, Andrea Tettamanzi
ICML
2003
IEEE
14 years 7 months ago
Identifying Predictive Structures in Relational Data Using Multiple Instance Learning
This paper introduces an approach for identifying predictive structures in relational data using the multiple-instance framework. By a predictive structure, we mean a structure th...
Amy McGovern, David Jensen
IPPS
2006
IEEE
14 years 24 days ago
Parallelization and performance characterization of protein 3D structure prediction of Rosetta
The prediction of protein 3D structure has become a hot research area in the post-genome era, through which people can understand a protein’s function in health and disease, exp...
Wenlong Li, Tao Wang, Eric Li, D. Baker, Li Jin, S...
BMCBI
2004
138views more  BMCBI 2004»
13 years 6 months ago
Constraint Logic Programming approach to protein structure prediction
Background: The protein structure prediction problem is one of the most challenging problems in biological sciences. Many approaches have been proposed using database information ...
Alessandro Dal Palù, Agostino Dovier, Feder...
BMCBI
2007
153views more  BMCBI 2007»
13 years 6 months ago
Can Clustal-style progressive pairwise alignment of multiple sequences be used in RNA secondary structure prediction?
Background: In ribonucleic acid (RNA) molecules whose function depends on their final, folded three-dimensional shape (such as those in ribosomes or spliceosome complexes), the se...
Amelia B. Bellamy-Royds, Marcel Turcotte