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» Structured Prediction with Relative Margin
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BMCBI
2006
143views more  BMCBI 2006»
13 years 6 months ago
Application of protein structure alignments to iterated hidden Markov model protocols for structure prediction
Background: One of the most powerful methods for the prediction of protein structure from sequence information alone is the iterative construction of profile-type models. Because ...
Eric D. Scheeff, Philip E. Bourne
CADE
2001
Springer
14 years 7 months ago
Context Trees
Context trees are a popular and effective tool for tasks such as compression, sequential prediction, and language modeling. We present an algebraic perspective of context trees for...
Harald Ganzinger, Robert Nieuwenhuis, Pilar Nivela
WWW
2009
ACM
14 years 7 months ago
Extracting community structure through relational hypergraphs
Social media websites promote diverse user interaction on media objects as well as user actions with respect to other users. The goal of this work is to discover community structu...
Yu-Ru Lin, Jimeng Sun, Paul Castro, Ravi B. Konuru...
BMCBI
2008
101views more  BMCBI 2008»
13 years 6 months ago
Scipio: Using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related
Background: For many types of analyses, data about gene structure and locations of non-coding regions of genes are required. Although a vast amount of genomic sequence data is ava...
Oliver Keller, Florian Odronitz, Mario Stanke, Mar...
IEAAIE
2010
Springer
13 years 4 months ago
S.cerevisiae Complex Function Prediction with Modular Multi-Relational Framework
Gene functions is an essential knowledge for understanding how metabolism works and designing treatments for solving malfunctions. The Modular Multi-Relational Framework (MMRF) is ...
Beatriz García Jiménez, Agapito Lede...