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BMCBI
2002
137views more  BMCBI 2002»
13 years 8 months ago
ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files
Background: Functional genomics involves the parallel experimentation with large sets of proteins. This requires management of large sets of open reading frames as a prerequisite ...
Konrad Büssow, Steve Hoffmann, Volker Sievert
SIGMOD
2009
ACM
134views Database» more  SIGMOD 2009»
14 years 8 months ago
Keyword query cleaning using hidden Markov models
In this paper, we consider the problem of keyword query cleaning for structured databases from a probabilistic approach. Keyword query cleaning consists of rewriting the user quer...
Ken Q. Pu
ICDT
2007
ACM
105views Database» more  ICDT 2007»
14 years 2 months ago
Optimization of Query Plans in the presence of Access Limitations
We consider the problem of querying data sources that have limited capabilities and can thus only be accessed by complying with certain binding patterns for their attributes. This ...
Andrea Calì, Diego Calvanese, Davide Martin...
GEOS
2009
Springer
14 years 22 days ago
SPARQL Query Re-writing Using Partonomy Based Transformation Rules
Abstract. Often the information present in a spatial knowledge base is represented at a different level of granularity and abstraction than the query constraints. For querying onto...
Prateek Jain, Peter Z. Yeh, Kunal Verma, Cory A. H...
VLDB
2007
ACM
229views Database» more  VLDB 2007»
14 years 2 months ago
Sum-Max Monotonic Ranked Joins for Evaluating Top-K Twig Queries on Weighted Data Graphs
In many applications, the underlying data (the web, an XML document, or a relational database) can be seen as a graph. These graphs may be enriched with weights, associated with t...
Yan Qi 0002, K. Selçuk Candan, Maria Luisa ...