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» Suffix tree construction algorithms on modern hardware
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ICDE
2004
IEEE
105views Database» more  ICDE 2004»
14 years 9 months ago
SPINE: Putting Backbone into String Indexing
The indexing technique commonly used for long strings, such as genomes, is the suffix tree, which is based on a vertical (intra-path) compaction of the underlying trie structure. ...
Naresh Neelapala, Romil Mittal, Jayant R. Haritsa
TOG
2008
145views more  TOG 2008»
13 years 7 months ago
Real-time KD-tree construction on graphics hardware
We present an algorithm for constructing kd-trees on GPUs. This algorithm achieves real-time performance by exploiting the GPU's streaming architecture at all stages of kd-tr...
Kun Zhou, Qiming Hou, Rui Wang 0004, Baining Guo
BIRD
2007
Springer
128views Bioinformatics» more  BIRD 2007»
14 years 1 months ago
Efficient and Scalable Indexing Techniques for Biological Sequence Data
We investigate indexing techniques for sequence data, crucial in a wide variety of applications, where efficient, scalable, and versatile search algorithms are required. Recent res...
Mihail Halachev, Nematollaah Shiri, Anand Thamildu...
VLSID
2005
IEEE
100views VLSI» more  VLSID 2005»
14 years 8 months ago
A Fast Buffered Routing Tree Construction Algorithm under Accurate Delay Model
Buffer insertion method plays a great role in modern VLSI design. Many buffer insertion algorithms have been proposed in recent years. However, most of them used simplified delay ...
Yibo Wang, Yici Cai, Xianlong Hong
ICCAD
1998
IEEE
81views Hardware» more  ICCAD 1998»
13 years 11 months ago
A simultaneous routing tree construction and fanout optimization algorithm
- This paper presents an optimal algorithm for solving the problem of simultaneous fanout optimization and routing tree construction for an ordered set of critical sinks. The algor...
Amir H. Salek, Jinan Lou, Massoud Pedram