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BMCBI
2007
113views more  BMCBI 2007»
13 years 10 months ago
Hinge Atlas: relating protein sequence to sites of structural flexibility
Background: Relating features of protein sequences to structural hinges is important for identifying domain boundaries, understanding structure-function relationships, and designi...
Samuel Flores, Long J. Lu, Julie Yang, Nicholas Ca...
PKDD
2010
Springer
188views Data Mining» more  PKDD 2010»
13 years 8 months ago
Semi-supervised Abstraction-Augmented String Kernel for Multi-level Bio-Relation Extraction
ervised Abstraction-Augmented String Kernel for Multi-Level Bio-Relation Extraction Pavel Kuksa1 , Yanjun Qi2 , Bing Bai2 , Ronan Collobert2 , Jason Weston3 , Vladimir Pavlovic1 , ...
Pavel P. Kuksa, Yanjun Qi, Bing Bai, Ronan Collobe...
BMCBI
2011
13 years 5 months ago
RAIphy: Phylogenetic classification of metagenomics samples using iterative refinement of relative abundance index profiles
Background: Computational analysis of metagenomes requires the taxonomical assignment of the genome contigs assembled from DNA reads of environmental samples. Because of the diver...
Ozkan U. Nalbantoglu, Samuel F. Way, Steven H. Hin...
BMCBI
2004
128views more  BMCBI 2004»
13 years 10 months ago
cuticleDB: a relational database of Arthropod cuticular proteins
Background: The insect exoskeleton or cuticle is a bi-partite composite of proteins and chitin that provides protective, skeletal and structural functions. Little information is a...
Christiana K. Magkrioti, Ioannis C. Spyropoulos, V...
HICSS
2011
IEEE
157views Biometrics» more  HICSS 2011»
13 years 2 months ago
Reusing Relational Queries for Intuitive Decision Optimization
— Decision optimization is used in many applications such as those for finding the best course of action in emergencies. However, optimization solutions require considerable mat...
Alexander Brodsky, Nathan E. Egge, Xiaoyang Sean W...