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BMCBI
2008
118views more  BMCBI 2008»
13 years 10 months ago
Kismeth: Analyzer of plant methylation states through bisulfite sequencing
Background: There is great interest in probing the temporal and spatial patterns of cytosine methylation states in genomes of a variety of organisms. It is hoped that this will sh...
Eyal Gruntman, Yijun Qi, R. Keith Slotkin, Ted Roe...
ICSE
1999
IEEE-ACM
14 years 2 months ago
CHIME: Customizable Hyperlink Insertion and Maintenance Engine for Software Engineering Environments
Source code browsing is an important part of program comprehension. Browsers expose semantic and syntactic relationships (such as between object references and definitions) in GU...
Premkumar T. Devanbu, Yih-Farn Chen, Emden R. Gans...
BMCBI
2008
169views more  BMCBI 2008»
13 years 10 months ago
MausDB: An open source application for phenotype data and mouse colony management in large-scale mouse phenotyping projects
Background: Large-scale, comprehensive and standardized high-throughput mouse phenotyping has been established as a tool of functional genome research by the German Mouse Clinic a...
Holger Maier, Christoph Lengger, Bruno Simic, Helm...
CDVE
2007
Springer
112views Visualization» more  CDVE 2007»
14 years 4 months ago
VICA: A Voronoi Interface for Visualizing Collaborative Annotations
Abstract. Large-scale scientific investigation often includes collaborative data exploration among geographically distributed researchers. The tools used for this exploration typi...
Yue Wang, James Shearer, Kwan-Liu Ma
SIGMOD
2008
ACM
157views Database» more  SIGMOD 2008»
14 years 10 months ago
CRD: fast co-clustering on large datasets utilizing sampling-based matrix decomposition
The problem of simultaneously clustering columns and rows (coclustering) arises in important applications, such as text data mining, microarray analysis, and recommendation system...
Feng Pan, Xiang Zhang, Wei Wang 0010