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» Synthesizing Stochasticity in Biochemical Systems
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ICCAD
2010
IEEE
117views Hardware» more  ICCAD 2010»
13 years 5 months ago
A synthesis flow for digital signal processing with biomolecular reactions
Abstract--We present a methodology for implementing digital signal processing (DSP) operations such as filtering with biomolecular reactions. From a DSP specification, we demonstra...
Hua Jiang, Aleksandra P. Kharam, Marc D. Riedel, K...
DAGSTUHL
2006
13 years 9 months ago
Modeling and Simulating Biological Processes with Stochastic Multiset Rewriting
ed Abstract Membrane systems are models of computation inspired by the structure and the function of biological cells. The model was introduced in 1998 by Gh. Paun and since then m...
Matteo Cavaliere, Sean Sedwards
NC
2006
130views Neural Networks» more  NC 2006»
13 years 7 months ago
Dynamic self-assembly in living systems as computation
Biochemical reactions taking place in living systems that map different inputs to specific outputs are intuitively recognized as performing information processing. Conventional wis...
Ann M. Bouchard, Gordon C. Osbourn
CORR
2010
Springer
105views Education» more  CORR 2010»
13 years 7 months ago
Molecular Recognition as an Information Channel: The Role of Conformational Changes
Molecular recognition, which is essential in processing information in biological systems, takes place in a crowded noisy biochemical environment and requires the recognition of a ...
Yonatan Savir, Tsvi Tlusty
TC
2011
13 years 2 months ago
An Architecture for Fault-Tolerant Computation with Stochastic Logic
—Mounting concerns over variability, defects and noise motivate a new approach for digital circuitry: stochastic logic, that is to say, logic that operates on probabilistic signa...
Weikang Qian, Xin Li, Marc D. Riedel, Kia Bazargan...