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    BMCBI
    2007
    157views more  BMCBI 2007»
    Constructing gene co-expression networks and predicting functions of unknown genes by random matrix theory
    13 years 8 months ago
    Constructing gene co-expression networks and predicting functions of unknown genes by random matrix theory
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    Background: Large-scale sequencing of entire genomes has ushered in a new age in biology. One of the next grand challenges is to dissect the cellular networks consisting of many i...
    Feng Luo, Yunfeng Yang, Jianxin Zhong, Haichun Gao...
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    BMCBI
    2007
    169views more  BMCBI 2007»
    Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana
    13 years 8 months ago
    Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana
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    Background: The central role of transcription factors (TFs) in higher eukaryotes has led to much interest in deciphering transcriptional regulatory interactions. Even in the best ...
    Henning Redestig, Daniel Weicht, Joachim Selbig, M...
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    BMCBI
    2008
    259views more  BMCBI 2008»
    DISCLOSE : DISsection of CLusters Obtained by SEries of transcriptome data using functional annotations and putative transcripti
    13 years 8 months ago
    DISCLOSE : DISsection of CLusters Obtained by SEries of transcriptome data using functional annotations and putative transcripti
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    Background: A typical step in the analysis of gene expression data is the determination of clusters of genes that exhibit similar expression patterns. Researchers are confronted w...
    Evert-Jan Blom, Sacha A. F. T. van Hijum, Klaas J....
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    BMCBI
    2007
    154views more  BMCBI 2007»
    h-Profile plots for the discovery and exploration of patterns in gene expression data with an application to time course data
    13 years 8 months ago
    h-Profile plots for the discovery and exploration of patterns in gene expression data with an application to time course data
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    Background: An ever increasing number of techniques are being used to find genes with similar profiles from microarray studies. Visualization of gene expression profiles can aid t...
    Yvonne E. Pittelkow, Susan R. Wilson
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    BMCBI
    2005
    97views more  BMCBI 2005»
    Phylogenetic reconstruction of ancestral character states for gene expression and mRNA splicing data
    13 years 8 months ago
    Phylogenetic reconstruction of ancestral character states for gene expression and mRNA splicing data
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    Background: As genomes evolve after speciation, gene content, coding sequence, gene expression, and splicing all diverge with time from ancestors with close relatives. A minimum e...
    Roald Rossnes, Ingvar Eidhammer, David A. Liberles
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