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KES
2005
Springer
14 years 2 months ago
Bayesian Validation of Fuzzy Clustering for Analysis of Yeast Cell Cycle Data
Clustering for the analysis of the gene expression profiles has been used for identifying the functions of the genes and of unknown genes. Since the genes usually belong to multipl...
Kyung-Joong Kim, Si-Ho Yoo, Sung-Bae Cho
BMCBI
2005
127views more  BMCBI 2005»
13 years 8 months ago
Dynamic modeling of cis-regulatory circuits and gene expression prediction via cross-gene identification
Background: Gene expression programs depend on recognition of cis elements in promoter region of target genes by transcription factors (TFs), but how TFs regulate gene expression ...
Li-Hsieh Lin, Hsiao-Ching Lee, Wen-Hsiung Li, Bor-...
BMCBI
2005
124views more  BMCBI 2005»
13 years 8 months ago
ErmineJ: Tool for functional analysis of gene expression data sets
Background: It is common for the results of a microarray study to be analyzed in the context of biologically-motivated groups of genes such as pathways or Gene Ontology categories...
Homin K. Lee, William Braynen, Kiran Keshav, Paul ...
BMCBI
2011
13 years 3 months ago
Motif-guided sparse decomposition of gene expression data for regulatory module identification
Background: Genes work coordinately as gene modules or gene networks. Various computational approaches have been proposed to find gene modules based on gene expression data; for e...
Ting Gong, Jianhua Xuan, Li Chen, Rebecca B. Riggi...
BMCBI
2008
170views more  BMCBI 2008»
13 years 8 months ago
Evaluation of GO-based functional similarity measures using S. cerevisiae protein interaction and expression profile data
Background: Researchers interested in analysing the expression patterns of functionally related genes usually hope to improve the accuracy of their results beyond the boundaries o...
Tao Xu, LinFang Du, Yan Zhou