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» Task-Oriented Integrated Use of Biological Web Data Sources
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SIGMOD
2009
ACM
137views Database» more  SIGMOD 2009»
14 years 7 months ago
Enabling enterprise mashups over unstructured text feeds with InfoSphere MashupHub and SystemT
Enterprise mashup scenarios often involve feeds derived from data created primarily for eye consumption, such as email, news, calendars, blogs, and web feeds. These data sources c...
David E. Simmen, Frederick Reiss, Yunyao Li, Sures...
BMCBI
2008
153views more  BMCBI 2008»
13 years 7 months ago
Version VI of the ESTree db: an improved tool for peach transcriptome analysis
Background: The ESTree database (db) is a collection of Prunus persica and Prunus dulcis EST sequences that in its current version encompasses 75,404 sequences from 3 almond and 1...
Barbara Lazzari, Andrea Caprera, Alberto Vecchiett...
BMCBI
2007
168views more  BMCBI 2007»
13 years 7 months ago
Advancing translational research with the Semantic Web
Background: A fundamental goal of the U.S. National Institute of Health (NIH) "Roadmap" is to strengthen Translational Research, defined as the movement of discoveries i...
Alan Ruttenberg, Tim Clark, William Bug, Matthias ...
WWW
2007
ACM
14 years 8 months ago
Mapping-driven XML transformation
Clio is an existing schema-mapping tool that provides user-friendly means to manage and facilitate the complex task of transformation and integration of heterogeneous data such as...
Haifeng Jiang, Howard Ho, Lucian Popa, Wook-Shin H...
BMCBI
2006
147views more  BMCBI 2006»
13 years 7 months ago
A case study in pathway knowledgebase verification
Background: Biological databases and pathway knowledgebases are proliferating rapidly. We are developing software tools for computer-aided hypothesis design and evaluation, and we...
Stephen A. Racunas, Nigam Shah, Nina V. Fedoroff