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BMCBI
2011
13 years 10 days ago
LAVA: An Open-Source Approach To Designing LAMP (Loop-Mediated Isothermal Amplification) DNA Signatures
Background: We developed an extendable open-source Loop-mediated isothermal AMPlification (LAMP) signature design program called LAVA (LAMP Assay Versatile Analysis). LAVA was cre...
Clinton Torres, Elizabeth A. Vitalis, Brian R. Bak...
ALMOB
2008
85views more  ALMOB 2008»
13 years 8 months ago
Noisy: Identification of problematic columns in multiple sequence alignments
Motivation: Sequence-based methods for phylogenetic reconstruction from (nucleic acid) sequence data are notoriously plagued by two effects: homoplasies and alignment errors. Larg...
Andreas W. M. Dress, Christoph Flamm, Guido Fritzs...
ICDE
2010
IEEE
202views Database» more  ICDE 2010»
14 years 8 months ago
Generating code for holistic query evaluation
We present the application of customized code generation to database query evaluation. The idea is to use a collection of highly efficient code templates and dynamically instantiat...
Konstantinos Krikellas, Marcelo Cintra, Stratis Vi...
ISQED
2007
IEEE
127views Hardware» more  ISQED 2007»
14 years 3 months ago
Thermal vs Energy Optimization for DVFS-Enabled Processors in Embedded Systems
— In the past, dynamic voltage and frequency scaling (DVFS) has been widely used for power and energy optimization in embedded system design. As thermal issues become increasingl...
Yongpan Liu, Huazhong Yang, Robert P. Dick, Hui Wa...
IPPS
2006
IEEE
14 years 2 months ago
Automatic application-specific microarchitecture reconfiguration
Applications for constrained embedded systems are subject to strict time constraints and restrictive resource utilization. With soft core processors, application developers can cu...
Shobana Padmanabhan, Ron K. Cytron, Roger D. Chamb...