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BMCBI
2007
115views more  BMCBI 2007»
13 years 7 months ago
Recognizing protein-protein interfaces with empirical potentials and reduced amino acid alphabets
Background: In structural genomics, an important goal is the detection and classification of protein–protein interactions, given the structures of the interacting partners. We h...
Guillaume Launay, Raul Mendez, Shoshana J. Wodak, ...
BIOINFORMATICS
2006
101views more  BIOINFORMATICS 2006»
13 years 8 months ago
A lock-and-key model for protein-protein interactions
Motivation: Protein-protein interaction networks are one of the major post-genomic data sources available to molecular biologists. They provide a comprehensive view of the global ...
Julie L. Morrison, Rainer Breitling, Desmond J. Hi...
CHI
2006
ACM
14 years 8 months ago
Getting the right design and the design right
We present a study comparing usability testing of a single interface versus three functionally equivalent but stylistically distinct designs. We found that when presented with a s...
Maryam Tohidi, William Buxton, Ronald Baecker, Abi...
ICSM
2005
IEEE
14 years 1 months ago
Crisp: A Debugging Tool for Java Programs
Crisp is a tool (i.e., an Eclipse plug-in) for constructing intermediate versions of a Java program that is being edited in an IDE such as Eclipse. After a long editing session, a...
Ophelia Chesley, Xiaoxia Ren, Barbara G. Ryder
ICFP
2007
ACM
14 years 7 months ago
Relating complexity and precision in control flow analysis
We analyze the computational complexity of kCFA, a hierarchy of control flow analyses that determine which functions may be applied at a given call-site. This hierarchy specifies ...
David Van Horn, Harry G. Mairson