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BMCBI
2006
147views more  BMCBI 2006»
13 years 9 months ago
A case study in pathway knowledgebase verification
Background: Biological databases and pathway knowledgebases are proliferating rapidly. We are developing software tools for computer-aided hypothesis design and evaluation, and we...
Stephen A. Racunas, Nigam Shah, Nina V. Fedoroff
NAR
2007
135views more  NAR 2007»
13 years 8 months ago
g: Profiler - a web-based toolset for functional profiling of gene lists from large-scale experiments
g:Profiler (http://biit.cs.ut.ee/gprofiler/) is a public web server for characterising and manipulating gene lists resulting from mining high-throughput genomic data. g:Profiler h...
Jüri Reimand, Meelis Kull, Hedi Peterson, Jaa...
POPL
2012
ACM
12 years 4 months ago
Access permission contracts for scripting languages
The ideal software contract fully specifies the behavior of an operation. Often, in particular in the context of scripting languages, a full specification may be cumbersome to s...
Phillip Heidegger, Annette Bieniusa, Peter Thieman...
ICDE
2007
IEEE
133views Database» more  ICDE 2007»
14 years 10 months ago
Preference-Aware Query and Update Scheduling in Web-databases
Typical web-database systems receive read-only queries, that generate dynamic web pages as a response, and writeonly updates, that keep information up-to-date. Users expect short ...
Huiming Qu, Alexandros Labrinidis
DAC
2003
ACM
14 years 10 months ago
Behavioral consistency of C and verilog programs using bounded model checking
We present an algorithm that checks behavioral consistency between an ANSI-C program and a circuit given in Verilog using Bounded Model Checking. Both the circuit and the program ...
Edmund M. Clarke, Daniel Kroening, Karen Yorav