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114
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BMCBI
2006
147views more  BMCBI 2006»
15 years 2 months ago
A case study in pathway knowledgebase verification
Background: Biological databases and pathway knowledgebases are proliferating rapidly. We are developing software tools for computer-aided hypothesis design and evaluation, and we...
Stephen A. Racunas, Nigam Shah, Nina V. Fedoroff
149
Voted
NAR
2007
135views more  NAR 2007»
15 years 2 months ago
g: Profiler - a web-based toolset for functional profiling of gene lists from large-scale experiments
g:Profiler (http://biit.cs.ut.ee/gprofiler/) is a public web server for characterising and manipulating gene lists resulting from mining high-throughput genomic data. g:Profiler h...
Jüri Reimand, Meelis Kull, Hedi Peterson, Jaa...
141
Voted
POPL
2012
ACM
13 years 10 months ago
Access permission contracts for scripting languages
The ideal software contract fully specifies the behavior of an operation. Often, in particular in the context of scripting languages, a full specification may be cumbersome to s...
Phillip Heidegger, Annette Bieniusa, Peter Thieman...
221
Voted
ICDE
2007
IEEE
133views Database» more  ICDE 2007»
16 years 3 months ago
Preference-Aware Query and Update Scheduling in Web-databases
Typical web-database systems receive read-only queries, that generate dynamic web pages as a response, and writeonly updates, that keep information up-to-date. Users expect short ...
Huiming Qu, Alexandros Labrinidis
144
Voted
DAC
2003
ACM
16 years 3 months ago
Behavioral consistency of C and verilog programs using bounded model checking
We present an algorithm that checks behavioral consistency between an ANSI-C program and a circuit given in Verilog using Bounded Model Checking. Both the circuit and the program ...
Edmund M. Clarke, Daniel Kroening, Karen Yorav