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BMCBI
2008
110views more  BMCBI 2008»
13 years 9 months ago
Testing for treatment effects on gene ontology
In studies that use DNA arrays to assess changes in gene expression, it is preferable to measure the significance of treatment effects on a group of genes from a pathway or functi...
Taewon Lee, Varsha G. Desai, Cruz Velasco, Robert ...
BMCBI
2004
100views more  BMCBI 2004»
13 years 9 months ago
Handling multiple testing while interpreting microarrays with the Gene Ontology Database
Background: The development of software tools that analyze microarray data in the context of genetic knowledgebases is being pursued by multiple research groups using different me...
Michael V. Osier, Hongyu Zhao, Kei-Hoi Cheung
BMCBI
2007
197views more  BMCBI 2007»
13 years 9 months ago
Boolean networks using the chi-square test for inferring large-scale gene regulatory networks
Background: Boolean network (BN) modeling is a commonly used method for constructing gene regulatory networks from time series microarray data. However, its major drawback is that...
Haseong Kim, Jae K. Lee, Taesung Park
DLOG
2003
13 years 10 months ago
Reasoning about Nominals with FaCT and RACER
We present a translation of looping alternating two-way automata into a comparably inexpressive description logic, which is contained in SHIQ. This enables us to perform the empti...
Jan Hladik
ICST
2009
IEEE
14 years 3 months ago
Optimizing Probabilities of Real-Time Test Case Execution
—Model-based test derivation for real-time system has been proven to be a hard problem for exhaustive test suites. Therefore, techniques for real-time testing do not aim to exhau...
Nicolás Wolovick, Pedro R. D'Argenio, Hongy...