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» Testing additive integrality gaps
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RECOMB
2010
Springer
14 years 2 months ago
Incremental Signaling Pathway Modeling by Data Integration
Constructing quantitative dynamic models of signaling pathways is an important task for computational systems biology. Pathway model construction is often an inherently incremental...
Geoffrey Koh, David Hsu, P. S. Thiagarajan
BMCBI
2007
93views more  BMCBI 2007»
13 years 7 months ago
Representing default knowledge in biomedical ontologies: application to the integration of anatomy and phenotype ontologies
Background: Current efforts within the biomedical ontology community focus on achieving interoperability between various biomedical ontologies that cover a range of diverse domain...
Robert Hoehndorf, Frank Loebe, Janet Kelso, Heinri...
BMCBI
2008
102views more  BMCBI 2008»
13 years 7 months ago
Improving protein function prediction methods with integrated literature data
Background: Determining the function of uncharacterized proteins is a major challenge in the post-genomic era due to the problem's complexity and scale. Identifying a protein...
Aaron Gabow, Sonia M. Leach, William A. Baumgartne...
WSC
2004
13 years 9 months ago
Statistical Analyses for Simulating Schedule Networks
This paper introduces the Stochastic Project Scheduling Simulation (SPSS) system and two additional useful statistical analysis tools. SPSS integrates CPM, PERT, and Discrete Even...
Dong-Eun Lee, Jonathan Jingsheng Shi
SODA
2010
ACM
149views Algorithms» more  SODA 2010»
14 years 5 months ago
Resource Minimization for Fire Containment
We consider the following model for fire containment. We are given an undirected graph G = (V, E) with a source vertex s where the fire starts. At each time step, the firefighters...
Parinya Chalermsook, Julia Chuzhoy