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    ALMOB
    2008
    131views more  ALMOB 2008»
    Fast algorithms for computing sequence distances by exhaustive substring composition
    13 years 10 months ago
    Fast algorithms for computing sequence distances by exhaustive substring composition
    Download  www.almob.org
    The increasing throughput of sequencing raises growing needs for methods of sequence analysis and comparison on a genomic scale, notably, in connection with phylogenetic tree reco...
    Alberto Apostolico, Olgert Denas
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    ALMOB
    2007
    155views more  ALMOB 2007»
    Finding coevolving amino acid residues using row and column weighting of mutual information and multi-dimensional amino acid rep
    13 years 10 months ago
    Finding coevolving amino acid residues using row and column weighting of mutual information and multi-dimensional amino acid rep
    Download  www.almob.org
    Background: Some amino acid residues functionally interact with each other. This interaction will result in an evolutionary co-variation between these residues – coevolution. Ou...
    Rodrigo Gouveia-Oliveira, Anders Gorm Pedersen
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    BIODATAMINING
    2008
    120views more  BIODATAMINING 2008»
    Filling the gap between biology and computer science
    13 years 10 months ago
    Filling the gap between biology and computer science
    Download  www.biodatamining.org
    This editorial introduces BioData Mining, a new journal which publishes research articles related to advances in computational methods and techniques for the extraction of useful ...
    Jesús S. Aguilar-Ruiz, Jason H. Moore, Mary...
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    BIOINFORMATICS
    2008
    106views more  BIOINFORMATICS 2008»
    Small RNA gene identification and mRNA target predictions in bacteria
    13 years 10 months ago
    Small RNA gene identification and mRNA target predictions in bacteria
    Download  www.biochpharma.univ-rennes1.fr
    Motivation: Bacterial small ribonucleic acids (sRNAs) that are not ribosomal and transfer or messenger RNAs were initially identified in the sixties whereas their molecular functi...
    Christophe Pichon, Brice Felden
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    BMCBI
    2010
    103views more  BMCBI 2010»
    MTRAP: Pairwise sequence alignment algorithm by a new measure based on transition probability between two consecutive pairs of r
    13 years 10 months ago
    MTRAP: Pairwise sequence alignment algorithm by a new measure based on transition probability between two consecutive pairs of r
    Download  www.biomedcentral.com
    Background: Sequence alignment is one of the most important techniques to analyze biological systems. It is also true that the alignment is not complete and we have to develop it ...
    Toshihide Hara, Keiko Sato, Masanori Ohya
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