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» The 2LIP model and its implementations
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POPL
2010
ACM
14 years 23 days ago
Programming with angelic nondeterminism
Angelic nondeterminism can play an important role in program development. It simplifies specifications, for example in deriving programs with a refinement calculus; it is the form...
Rastislav Bodík, Satish Chandra, Joel Galen...
NSDI
2007
14 years 19 days ago
An Experimentation Workbench for Replayable Networking Research
The network and distributed systems research communities have an increasing need for “replayable” research, but our current experimentation resources fall short of reaching th...
Eric Eide, Leigh Stoller, Jay Lepreau
BMCBI
2007
179views more  BMCBI 2007»
13 years 10 months ago
rMotifGen: random motif generator for DNA and protein sequences
Background: Detection of short, subtle conserved motif regions within a set of related DNA or amino acid sequences can lead to discoveries about important regulatory domains such ...
Eric C. Rouchka, C. Timothy Hardin
BMCBI
2008
133views more  BMCBI 2008»
13 years 10 months ago
ElliPro: a new structure-based tool for the prediction of antibody epitopes
Background: Reliable prediction of antibody, or B-cell, epitopes remains challenging yet highly desirable for the design of vaccines and immunodiagnostics. A correlation between a...
Julia V. Ponomarenko, Huynh-Hoa Bui, Wei Li, Nicho...
BMCBI
2010
119views more  BMCBI 2010»
13 years 10 months ago
Coherent pipeline for biomarker discovery using mass spectrometry and bioinformatics
Background: Robust biomarkers are needed to improve microbial identification and diagnostics. Proteomics methods based on mass spectrometry can be used for the discovery of novel ...
Ali Al-Shahib, Raju Misra, Nadia Ahmod, Min Fang, ...