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» The ASTRAL compendium for protein structure and sequence ana...
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ARTMED
2004
133views more  ARTMED 2004»
13 years 7 months ago
Bayesian network multi-classifiers for protein secondary structure prediction
Successful secondary structure predictions provide a starting point for direct tertiary structure modelling, and also can significantly improve sequence analysis and sequence-stru...
Víctor Robles, Pedro Larrañaga, Jos&...
BMCBI
2010
139views more  BMCBI 2010»
13 years 7 months ago
PoGO: Prediction of Gene Ontology terms for fungal proteins
Background: Automated protein function prediction methods are the only practical approach for assigning functions to genes obtained from model organisms. Many of the previously re...
Jaehee Jung, Gangman Yi, Serenella A. Sukno, Micha...
BMCBI
2007
102views more  BMCBI 2007»
13 years 7 months ago
qPIPSA: Relating enzymatic kinetic parameters and interaction fields
Background: The simulation of metabolic networks in quantitative systems biology requires the assignment of enzymatic kinetic parameters. Experimentally determined values are ofte...
Razif R. Gabdoulline, Matthias Stein, Rebecca C. W...
NAR
2002
85views more  NAR 2002»
13 years 7 months ago
CKAAPs DB: a Conserved Key Amino Acid Positions DataBase
The Conserved Key Amino Acid Positions DataBase (CKAAPs DB) provides access to an analysis of structurally similar proteins with dissimilar sequences where key residues within a c...
Wilfred W. Li, Boojala V. B. Reddy, John G. Tate, ...
BMCBI
2010
86views more  BMCBI 2010»
13 years 7 months ago
ICC-CLASS: isotopically-coded cleavable crosslinking analysis software suite
Background: Successful application of crosslinking combined with mass spectrometry for studying proteins and protein complexes requires specifically-designed crosslinking reagents...
Evgeniy V. Petrotchenko, Christoph H. Borchers