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BMCBI
2010
110views more  BMCBI 2010»
13 years 8 months ago
OLS Dialog: An open-source front end to the Ontology Lookup Service
Background: With the growing amount of biomedical data available in public databases it has become increasingly important to annotate data in a consistent way in order to allow ea...
Harald Barsnes, Richard G. Côté, Ingv...
BMCBI
2005
77views more  BMCBI 2005»
13 years 8 months ago
Ontological visualization of protein-protein interactions
Background: Cellular processes require the interaction of many proteins across several cellular compartments. Determining the collective network of such interactions is an importa...
Harold J. Drabkin, Christopher Hollenbeck, David P...
OSDI
2006
ACM
14 years 8 months ago
From Uncertainty to Belief: Inferring the Specification Within
Automatic tools for finding software errors require a set of specifications before they can check code: if they do not know what to check, they cannot find bugs. This paper presen...
Ted Kremenek, Paul Twohey, Godmar Back, Andrew Y. ...
BMCBI
2006
117views more  BMCBI 2006»
13 years 8 months ago
G-InforBIO: integrated system for microbial genomics
Background: Genome databases contain diverse kinds of information, including gene annotations and nucleotide and amino acid sequences. It is not easy to integrate such information...
Naoto Tanaka, Takashi Abe, Satoru Miyazaki, Hideak...
NAR
2008
159views more  NAR 2008»
13 years 8 months ago
The UCSC Genome Browser Database: 2008 update
The University of California, Santa Cruz, Genome Browser Database (GBD) provides integrated sequence and annotation data for a large collection of vertebrate and model organism ge...
Donna Karolchik, Robert M. Kuhn, Robert Baertsch, ...