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BMCBI
2005
253views more  BMCBI 2005»
13 years 8 months ago
The Use of Edge-Betweenness Clustering to Investigate Biological Function in Protein Interaction Networks
Background: This paper describes an automated method for finding clusters of interconnected proteins in protein interaction networks and retrieving protein annotations associated ...
Ruth Dunn, Frank Dudbridge, Christopher M. Sanders...
BMCBI
2011
13 years 3 months ago
PileLine: a toolbox to handle genome position information in next-generation sequencing studies
Background: Genomic position (GP) files currently used in next-generation sequencing (NGS) studies are always difficult to manipulate due to their huge size and the lack of approp...
Daniel Glez-Peña, Gonzalo Gómez-L&oa...
LREC
2008
131views Education» more  LREC 2008»
13 years 9 months ago
From D-Coi to SoNaR: a reference corpus for Dutch
The computational linguistics community in The Netherlands and Belgium has long recognized the dire need for a major reference corpus of written Dutch. In part to answer this need...
Nelleke Oostdijk, Martin Reynaert, Paola Monachesi...
BMCBI
2010
178views more  BMCBI 2010»
13 years 8 months ago
CNV Workshop: an integrated platform for high-throughput copy number variation discovery and clinical diagnostics
Background: Recent studies have shown that copy number variations (CNVs) are frequent in higher eukaryotes and associated with a substantial portion of inherited and acquired risk...
Xiaowu Gai, Juan C. Perin, Kevin Murphy, Ryan O'Ha...
BMCBI
2008
101views more  BMCBI 2008»
13 years 8 months ago
Scipio: Using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related
Background: For many types of analyses, data about gene structure and locations of non-coding regions of genes are required. Although a vast amount of genomic sequence data is ava...
Oliver Keller, Florian Odronitz, Mario Stanke, Mar...