The Gene Ontology (GO) project (http://www.gene ontology.org/) provides a set of structured, controlled vocabularies for community use in annotating genes, gene products and seque...
This paper presents an approach and a tool to increase specification quality by using a combination of UML and formal languages. Our approach is based on the expression of the UML ...
Background: Sequence motifs representing transcription factor binding sites (TFBS) are commonly encoded as position frequency matrices (PFM) or degenerate consensus sequences (CS)...
Phylogenetic analysis and examination of protein domains allow accurate genome annotation and are invaluable to study proteins and protein complex evolution. However, two sequence...
Blaise T. F. Alako, Daphne Rainey, Harm Nijveen, J...
By comparing genomes among both closely and distally related species, comparative genomics analysis characterizes structures and functions of different genomes in both conserved a...
Xinghuo Zeng, Matthew J. Nesbitt, Jian Pei, Ke Wan...