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WOA
2000
13 years 10 months ago
OO Reactive Agents for RDM-Based Simulations
The computer simulation of complex phenomena is a challenging issue for studying their properties. Several models and techniques have been developed in order to provide useful con...
Stefania Bandini, Flavio De Paoli, Sara Manzoni, C...
ALIFE
1998
13 years 8 months ago
Self-Evolution in a Constructive Binary String System
We examine the qualitative dynamics of a catalytic self-organizing reaction system of binary strings that is inspired by the chemical information processing metaphor. A string is ...
Peter Dittrich, Wolfgang Banzhaf
CDC
2008
IEEE
122views Control Systems» more  CDC 2008»
14 years 3 months ago
Metabolic networks analysis using convex optimization
— Metabolic networks map the biochemical reactions in a living cell to the flow of various chemical substances in the cell, which are called metabolites. A standard model of a m...
A. Agung Julius, Marcin Imielinski, George J. Papp...
CSB
2005
IEEE
129views Bioinformatics» more  CSB 2005»
14 years 2 months ago
A Pivoting Algorithm for Metabolic Networks in the Presence of Thermodynamic Constraints
A linear programming algorithm is presented to constructively compute thermodynamically feasible fluxes and change in chemical potentials of reactions for a metabolic network. It...
R. Nigam, S. Liang
TCS
2008
13 years 8 months ago
On process rate semantics
We provide translations between process algebra and systems of chemical reactions. We show that the translations preserve discrete-state (stochastic) and continuous-state (concent...
Luca Cardelli