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BMCBI
2007
104views more  BMCBI 2007»
13 years 8 months ago
Predicting active site residue annotations in the Pfam database
Background: Approximately 5% of Pfam families are enzymatic, but only a small fraction of the sequences within these families (<0.5%) have had the residues responsible for cata...
Jaina Mistry, Alex Bateman, Robert D. Finn
BMCBI
2006
172views more  BMCBI 2006»
13 years 8 months ago
BioWarehouse: a bioinformatics database warehouse toolkit
Background: This article addresses the problem of interoperation of heterogeneous bioinformatics databases. Results: We introduce BioWarehouse, an open source toolkit for construc...
Thomas J. Lee, Yannick Pouliot, Valerie Wagner, Pr...
BMCBI
2007
115views more  BMCBI 2007»
13 years 8 months ago
Correlation between structure and temperature in prokaryotic metabolic networks
Background: In recent years, an extensive characterization of network structures has been made in an effort to elucidate design principles of metabolic networks, providing valuabl...
Kazuhiro Takemoto, Jose C. Nacher, Tatsuya Akutsu
CISIS
2010
IEEE
14 years 3 months ago
Logic-Based Steady-State Analysis and Revision of Metabolic Networks with Inhibition
—This paper presents a qualitative logic-based method for the steady-state analysis and revision of metabolic networks with inhibition. The approach is able to automatically revi...
Oliver Ray, Ken E. Whelan, Ross D. King
DSL
1997
13 years 10 months ago
Service Combinators for Web Computing
The World-Wide Web is rich in content and services, but access to these resources must be obtained mostly through manual browsers. We would like to be able to write programs that ...
Luca Cardelli, Rowan Davies