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DNA
2005
Springer
113views Bioinformatics» more  DNA 2005»
14 years 2 months ago
A Self-assembly Model of Time-Dependent Glue Strength
Abstract Self-assembly is a ubiquitous process in which small objects selforganize into larger and complex structures. In 2000, Rothemund and Winfree proposed a Tile Assembly Model...
Sudheer Sahu, Peng Yin, John H. Reif
GECCO
2008
Springer
158views Optimization» more  GECCO 2008»
13 years 10 months ago
Structure and parameter estimation for cell systems biology models
In this work we present a new methodology for structure and parameter estimation in cell systems biology modelling. Our modelling framework is based on P systems, an unconl comput...
Francisco José Romero-Campero, Hongqing Cao...
BMCBI
2010
126views more  BMCBI 2010»
13 years 9 months ago
Simulation of a Petri net-based Model of the Terpenoid Biosynthesis Pathway
Background: The development and simulation of dynamic models of terpenoid biosynthesis has yielded a systems perspective that provides new insights into how the structure of this ...
Aliah Hazmah Hawari, Zeti-Azura Mohamed-Hussein
CLEIEJ
2006
88views more  CLEIEJ 2006»
13 years 8 months ago
A Stochastic Concurrent Constraint Based Framework to Model and Verify Biological Systems
Concurrent process calculi are powerful formalisms for modelling concurrent systems. The mathematical style underlying process calculi allow to both model and verify properties of...
Carlos Olarte, Camilo Rueda
EMSOFT
2006
Springer
14 years 14 days ago
A timing model for synchronous language implementations in simulink
We describe a simple scheme for mapping synchronous language models, in the form of Boolean Mealy Machines, into timed automata. The mapping captures certain idealized implementat...
Timothy Bourke, Arcot Sowmya