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» The Complexity of Orbits of Computably Enumerable Sets
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RECOMB
2005
Springer
14 years 7 months ago
Improved Pattern-Driven Algorithms for Motif Finding in DNA Sequences
Abstract. In order to guarantee that the optimal motif is found, traditional pattern-driven approaches perform an exhaustive search over all candidate motifs of length l. We develo...
Sing-Hoi Sze, Xiaoyan Zhao
EOR
2011
140views more  EOR 2011»
12 years 11 months ago
Compact bidding languages and supplier selection for markets with economies of scale and scope
Combinatorial auctions have been used in procurement markets with economies of scope. Preference elicitation is already a problem in single-unit combinatorial auctions, but it bec...
Martin Bichler, Stefan Schneider, Kemal Guler, Meh...
IPPS
1997
IEEE
13 years 11 months ago
Designing Efficient Distributed Algorithms Using Sampling Techniques
In this paper we show the power of sampling techniques in designing efficient distributed algorithms. In particular, we show that using sampling techniques, on some networks, sele...
Sanguthevar Rajasekaran, David S. L. Wei
BMCBI
2010
189views more  BMCBI 2010»
13 years 7 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
CASES
2007
ACM
13 years 11 months ago
Rethinking custom ISE identification: a new processor-agnostic method
The last decade has witnessed the emergence of the Application Specific Instruction-set Processor (ASIP) as a viable platform for embedded systems. Extensible ASIPs allow the user...
Ajay K. Verma, Philip Brisk, Paolo Ienne