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» The Complexity of the Matching-Cut Problem
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RECOMB
2005
Springer
14 years 8 months ago
Rapid Protein Side-Chain Packing via Tree Decomposition
This paper proposes a novel tree decomposition based side-chain assignment algorithm, which can obtain the globally optimal solution of the side-chain packing problem very efficien...
Jinbo Xu
RECOMB
2005
Springer
14 years 8 months ago
The Factor Graph Network Model for Biological Systems
Abstract. We introduce an extended computational framework for studying biological systems. Our approach combines formalization of existing qualitative models that are in wide but ...
Irit Gat-Viks, Amos Tanay, Daniela Raijman, Ron Sh...
RECOMB
2002
Springer
14 years 8 months ago
Phase-independent rhythmic analysis of genome-wide expression patterns
We introduce a model-based analysis technique for extracting and characterizing rhythmic expression pro les from genome-wide DNA microarray hybridization data. These patterns are ...
Christopher James Langmead, Anthony K. Yan, C. Rob...
STOC
2003
ACM
188views Algorithms» more  STOC 2003»
14 years 8 months ago
Almost random graphs with simple hash functions
We describe a simple randomized construction for generating pairs of hash functions h1, h2 from a universe U to ranges V = [m] = {0, 1, . . . , m - 1} and W = [m] so that for ever...
Martin Dietzfelbinger, Philipp Woelfel
OSDI
2006
ACM
14 years 8 months ago
Operating System Profiling via Latency Analysis
Operating systems are complex and their behavior depends on many factors. Source code, if available, does not directly help one to understand the OS's behavior, as the behavi...
Nikolai Joukov, Avishay Traeger, Rakesh Iyer, Char...
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