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» The Distribution of Genomic Distance between Random Genomes
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BMCBI
2010
135views more  BMCBI 2010»
15 years 4 months ago
GIGA: a simple, efficient algorithm for gene tree inference in the genomic age
Background: Phylogenetic relationships between genes are not only of theoretical interest: they enable us to learn about human genes through the experimental work on their relativ...
Paul D. Thomas
CSB
2003
IEEE
15 years 9 months ago
Genomic Sequence Analysis Using Gap Sequences and Pattern Filtering
A new pattern filtering technique is developed to analyze the genomic sequence in this research based on gap sequences, in which the distance of the same symbol is recorded consec...
Shih-Chieh Su, Chia H. Yeh, C. C. Jay Kuo
BMCBI
2005
198views more  BMCBI 2005»
15 years 4 months ago
Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
Background: The sequencing of the human genome has enabled us to access a comprehensive list of genes (both experimental and predicted) for further analysis. While a majority of t...
Qicheng Ma, Gung-Wei Chirn, Richard Cai, Joseph D....
TIT
2010
118views Education» more  TIT 2010»
14 years 11 months ago
Joint sampling distribution between actual and estimated classification errors for linear discriminant analysis
Error estimation must be used to find the accuracy of a designed classifier, an issue that is critical in biomarker discovery for disease diagnosis and prognosis in genomics and p...
Amin Zollanvari, Ulisses Braga-Neto, Edward R. Dou...
CPM
2007
Springer
102views Combinatorics» more  CPM 2007»
15 years 10 months ago
Non-breaking Similarity of Genomes with Gene Repetitions
Abstract. In this paper we define a new similarity measure, the nonbreaking similarity, which is the complement of the famous breakpoint distance between genomes (in general, betw...
Zhixiang Chen, Bin Fu, Jinhui Xu, Bo-Ting Yang, Zh...